rs51460934 SNP Detail

Summary

• ID
  rs51460934
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:96456711 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACAG TACGTTTCTT TAGGCACCAG
  K
  CATGTACATG GTACTTATGC ATACG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135516743	ENSMUSSNP4788445	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	T
ss320842031	CHEV_3_96353318	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51460934					SNP	T	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:96456711 () rs orientation: forward

Symbol	Name	Function Class
Rr397861	regulatory region 397861	1726 bp downstream
Rr581314	regulatory region 581314	1412 bp distal
Rr581315	regulatory region 581315	1825 bp distal
Rr581316	regulatory region 581316	37 bp proximal
Rr581317	regulatory region 581317	1755 bp proximal