rs51459344 SNP Detail

Summary

• ID
  rs51459344
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  128
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr19:39303195 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTTATTTCT GATTTATATG TGTAAAGCTA TTGTCCTTAG
  CAATGCCTTG TTTACAATAT TTGTTTTTAA TGTCTGTACT TCCCACAATT AAAATACCAG
  S
  CCTTTTGATA GCAGAGACCT CTAGCTATAG CTTGACCTAT TGTATTAGTA TGGAGTACTT
  TAGAACCAAT TTCATTTGTA TTCTTTTTCC ATTCATCCTT                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	CAST/EiJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss60312161	NES15803723	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	C	C
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	CAST/EiJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs51459344					SNP	G	G	G	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60312161	NES15803723	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:39303195 () rs orientation: forward

Symbol	Name	Function Class
Cyp2c29	cytochrome P450, family 2, subfamily c, polypeptide 29	Intron
Tssr156337	transcription start site region 156337	729 bp upstream
Tssr156338	transcription start site region 156338	763 bp upstream
Tssr156339	transcription start site region 156339	788 bp upstream
Tssr156340	transcription start site region 156340	888 bp upstream
Tssr156341	transcription start site region 156341	937 bp upstream