rs51453009 SNP Detail

Summary

• ID
  rs51453009
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150016246 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTAAACCAG AGTAGACTAA ACTTTAGGGA TGAGGAAAGC
  CCCTTGGAGA GTCAGGCTGA CTGTGTCTGT TCGTCGAGCA AATTGGGGAC TGTTTATCTC
  C
  GGGGGAGGGG GGGAGGGTGT GCAGCACCCC TCTGCCCAGC AGCGTTCTCT GGAAAAGTGG
  ACGGGGAAGC CGCAGCAGGG CCCTGTGAGT ACCCCAACT                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss148043345	ENSMUSSNP1041813	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs51453009					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150016246 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr605111	regulatory region 605111			1863 bp proximal
Spsb1	splA/ryanodine receptor domain and SOCS box containing 1			Intron
				Noncoding-Transcript-Variant