rs51448849 SNP Detail

Summary

• ID
  rs51448849
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124067580 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTACTCTTTC CTTTCATCCC
  TCTAAACTTT CCATATAACC TTCCTTGCTC CCTCTCAATT GCATGGTGTC TTTTAAAGTT
  AACATATATA TATATATATA TATATATATA TATATATATA TATATATATA TATATCCATT
  CATGTGTGTG TGATATGCAT ACTACAGTGT GGATGTGCAC AGCAGAGTAT GGATTCAGGG
  W
  GTCACTTTTC ACTTTCCACC CTGTTAGAGG CAAGGTCTCT CTTGTTTCTG TGACTGCCTG
  TAGATGAACA CTGTAGCATT TACCTTCTTA CATAGGTGCT GGGCTCTGAT TTCAGGTTGT
  CGAGTTTGCC CAGAAAGTAC TTTGCCCCAC TAAGCCCGCT CTCTGGCTCC AAATCAGCAA
  TGGACTTTTA ATTTCTCTAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320926849	CHEV_3_123976849	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs51448849					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124067580 () rs orientation: forward

Symbol	Name	Function Class
Gm43731	predicted gene 43731	within coordinates
Rr584584	regulatory region 584584	571 bp distal
Rr584585	regulatory region 584585	964 bp proximal