rs51443290 SNP Detail

Summary

• ID
  rs51443290
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148600681 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACCAGCTA AATCTATCAA
  CTGGGCCTCT CTCCGAGGCA GCATCTACTA GATGCCTTTT CTCCTGAGTA AGGCTCAACT
  TTCTCGTTTG CGTATCTCAA ACAATTGTTG CTGGAAACTG TGCTTTTCAG ACAATATCCT
  GCTGGAAACT CTGGATTGGG CTTTAATCCC TGCCACCGCC ACTGTTGCAG AGCCTTCCGG
  M
  TCTTGCTCAG AAGGGTTCTA CAGCCCTGAC TTCCTCGATG TGCATTTGCC TTGTCTCTGC
  TGCTTGCCTT CGTTTCTGAC CCTGCCTTCC TAAGTTCCCT GTCACTGTGT ACAGCCTAAT
  GGTCAAGCAG TGGTAGAGCA TCAGTGTTGC TCAGAAGCCA GGAGCCCTGA AGGCTGTCAT
  CACACTCTCC TGATGCAGGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136065034	ENSMUSSNP2152156	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51443290					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148600681 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Rr587222	regulatory region 587222	458 bp proximal
Rr587223	regulatory region 587223	1278 bp proximal