rs51442691 SNP Detail

Summary

• ID
  rs51442691
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:118127636 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGCA GGAAAGCCAG TGCCTTGGGA
  R
  CTGGCCCTTC AGAGGATCTG CTTGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147302760	ENSMUSSNP4220142	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51442691					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:118127636 () rs orientation: forward

Symbol	Name	Function Class
Ptprf	protein tyrosine phosphatase receptor type F	Intron
Rr598358	regulatory region 598358	within coordinates
Rr598359	regulatory region 598359	361 bp proximal
Rr598360	regulatory region 598360	465 bp proximal
Tssr43045	transcription start site region 43045	702 bp upstream