rs51442455 SNP Detail

Summary

• ID
  rs51442455
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:159284096 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGAAGTAG CTTACATTAT
  GGCCAGGTAG ACAATGTTGG AATCTAAATG ACTACAGGAC ACCCCCTTTG ATATCTACAG
  GGGAATTCTT GGTGTGTGGG AAGTAGCTAC CATACACATT AAGGTACGTA GTACCTAATC
  TACACTGATT AGGAAATTGA TTTATTTTTT CTATTTCTAG AATGTTTTCT GTTCTTCCTT
  C
  TCAAATAAAG AAGGAAGACA GATAGAACAA TATTTAGCTT ATTTATTTTG ATAACTGTGA
  CCTCCTGCTT CAATTCTTCT GAGATTCTGG CCTGTGCCAG CAGAAGTGTT TTTTTTTTTT
  TTTTTTTCTT CCCAGTCTTA GAAAACAGAA AGTTCTTATG TAGGGAAATG TGGTTTATGA
  CCATCCTGCT ATCCTGACTT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148132371	ENSMUSSNP4046029	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51442455					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:159284096 () rs orientation: forward

Symbol	Name	Function Class
Rr568916	regulatory region 568916	1483 bp proximal
Rr568917	regulatory region 568917	1574 bp proximal