rs51436714 SNP Detail

Summary

• ID
  rs51436714
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:43508281 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGGAGCCA CTAACTACAC
  AGAAACTAAG AGTAAAGAGG GGATAGGCCC TATTCTTAGT TAGAGCATTA AACAGAAGAG
  AATGTTCAGG AATATTTTAT AAGTTGTGCA TGTATAAATT TTTAGAAGCA TGGATCCCAT
  TTCTCTCCAG AAAGAGAAGA ATGCCTTGAG TACAAACCCC ACAGGAATAA CTAGGAATTT
  R
  AAGGATAGCT CTTAATTCAC CTCCTCCAAA TATTTTCAGC ACCGTGAGAC ATTGAACTGA
  CTTTTTTCAT CTTTGACATT TCCAGACCAA TAACTCACTT TTTAAAAGGA TGCATTCAGT
  GTATATTGAT CATATACATC CATTTCCTTC CTCCTACCAA CTCCCCTATG TATGCCCACC
  TGTTCTCCTG GATTAATGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss52393745	NES15382214	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs51436714					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52393745	NES15382214	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:43508281 () rs orientation: forward

Symbol	Name	Function Class
Tssr113357	transcription start site region 113357	1328 bp downstream