rs51418503 SNP Detail

Summary

• ID
  rs51418503
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:142440385 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACGTGAGG CACGGAAGCC
  TTTTGAAGTC CTCAACTGTC AAGAGTAGGT CTCTGCCTTA GGAATATGGC TGAGCCAGTA
  TGCAAAGACA AACCCATCTC ATCTCTGGAT GAGGACAGAG CTGGGACTAG GGCAAACAGA
  GGGAGGCCTC AGGTACTAAA ACCCTCGACG GTTAAGATAA ATAGATTTGA ATGCAATGTT
  Y
  TAAAAAATAA AATAAAATTT TAAGTATGTA CTCTGTACCC TACATTGCCT AGTTTCCTCT
  AAGCACACTC AGCCCTCAGG TACAAGATAA ATACATTCTG GACATCTAGT GTGCAGCACA
  ATCTCTCTAG CTAGGAATGA TATAGACTGG AAACTCTCAA AAGAATGAAC TCATGAATCT
  TCTCCCACCA CTGAGTCCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147736777	ENSMUSSNP2620662	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
ss320531951	CHEV_2_142424201	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51418503					SNP	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:142440385 () rs orientation: forward

Symbol	Name	Function Class
Rr566224	regulatory region 566224	647 bp proximal