rs51416453 SNP Detail

Summary

• ID
  rs51416453
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:5403232 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTTC TGGGCATCTT CGCGTCCTCA
  T
  CTCAGGGGGC AGCACTTGCA AGGCA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss132936847	ENSMUSSNP4973801	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
ss321728960	CHEV_6_5353232	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51416453					SNP	T	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:5403232 () rs orientation: forward

Symbol	Name	Function Class
Asb4	ankyrin repeat and SOCS box-containing 4	Intron
Rr626139	regulatory region 626139	1212 bp distal
Rr626140	regulatory region 626140	1719 bp distal
Rr626141	regulatory region 626141	within coordinates
Rr626142	regulatory region 626142	1989 bp proximal