rs51410094 SNP Detail

Summary

• ID
  rs51410094
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:18817988 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTGGAATC CCTAGAGCTG
  GAGTTAAAGG AGGTTGAGAG TCACCCAGTG TGGGAGCCAG CAACCAAACG TGAGTCCTCT
  GATGTTGTGG TTTTAATGAC AATGGTATCT CTTCCTGTAT GCTAAGAAAG AGATAGCTGA
  TTTTTCCATG AGTGGGTGAA CAGGGCGTGG GGAGTAGAGA TTGCTTTAAT GAGACTGTTA
  Y
  GTTTGAATAA TTGGAATAAT CATCATCAGT TGCTGGAACT GTTTGGGAAG AATTGGAGGA
  GTGGTGCTGG TGGTGGGCAT TCTCAGGTAG TGCTCTGTCT GTCTGTCCAT CTGATGCTTG
  TGGATTAGGA GGTAAGCTCT CAGCTAATGT GCCAGTGCCA TACCTACCTG CCTGCCTGCT
  GCCATGCTCC ACACCATGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss133041731	ENSMUSSNP4924013	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
ss321759393	CHEV_6_18767989	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51410094					SNP	C	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:18817988 () rs orientation: forward

Symbol	Name	Function Class
Rr626951	regulatory region 626951	1437 bp proximal
Rr626952	regulatory region 626952	1563 bp proximal