rs51397190 SNP Detail

Summary

• ID
  rs51397190
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:74592459 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCCACTTT ATACCTCTTC
  CAGGATTACA TAGCAGACCT AGTTCTGAGC TTCTTTCAAA TCCCTGGTCT TCTCATCTTC
  TCAGGCTTCT TAAAATTCCA GCCTTTCTAT TGGTTAAGAG AATTTCATTG TAATACATAG
  GATTACTTTC GGTTTTGATT TTTTTTTTCT CCTACAGGTA CTGGCCAGCC TGTATCTTCA
  R
  TGAAGTGTCT TAACATTTTA GTGTATTTTA ATCATTGATT TAATCGGAGA TTTGAGATGT
  ATTGTCTCTG ATCAAATACA GCCATTACAG TTATTATTTT CCCTAGGTTT CCTCTCACAA
  AAGTTGACTT TATTCTTCAC AGCAATTTTG TATTTATAGA AAAAAAATGT GTAGAAACTA
  CTCCTGCATG TTTCACAGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ
ss52506933	NES15580660	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ
rs51397190					SNP	A	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52506933	NES15580660	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:74592459 () rs orientation: forward

Symbol	Name	Function Class
4933402J15Rik	RIKEN cDNA 4933402J15 gene	508 bp upstream
Gm49171	predicted gene, 49171	within coordinates