rs51382625 SNP Detail

Summary

• ID
  rs51382625
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151478309 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCTACACT CTAAAGATAT
  TAAAGATTTC ACTAAGATCT GATAAAGACG TTCAACAAAT AGAAATGGGG CTTAGTTTGA
  AGCTCACCAA GCTTCAAAAA TATAACTAGA GACAGACCTA CAAGGGGGGG AAAGCTCACT
  ACTATGAAAA CTTTAAAACA TTGAGGAAGA AACTGGATGG TCTCAGGTTC AGGGGTGGGG
  G
  TTGGGGGAGG GTAGAGTTAA TATTAAGGAA AGGACTGTAT TACCAAGAAA GATCTGGGGC
  TTGTTGCAGT CTTCATCAAA ATAACAATGG TGCTCCTCAC AGAACTAGAG AAAACAATCT
  TAAATTTCAC ATAGAAGCAC AAAAGACCTC AAGTAGCAAA AGTGGCTTAA GCAGAAGGAA
  CAACATTAGA TATATTAATA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss136098065	ENSMUSSNP3391520	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss321026855	CHEV_3_151435636	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs51382625					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151478309 () rs orientation: forward

Symbol	Name	Function Class
Rr587415	regulatory region 587415	1613 bp distal
Rr587416	regulatory region 587416	1286 bp distal
Rr587417	regulatory region 587417	1355 bp distal