rs51379140 SNP Detail

Summary

• ID
  rs51379140
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150143977 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GGTGGATGTT GGTGGGAACC AGCTGTGGGG TCACTAGTGT
  GATGGTGGAT GTTGGTGGGA ACCAGCTGTG GGGTCACTAG TGTGATGGTG GATGTTGGTG
  A
  GAACCAGCTG TGGGGTCACT AGTGTGATGG TGGATGTTGG TGAGAACCAG CTGTGGGGTC
  ACTAGTGTGG TGGTGGTGGG AACCAGCTGA TGTCACTAGT G                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss148046461	ENSMUSSNP3286328	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs51379140					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150143977 () rs orientation: forward

Symbol	Name	Function Class
Gm13067	predicted gene 13067	within coordinates
Rr398877	regulatory region 398877	378 bp upstream
Rr605159	regulatory region 605159	1754 bp distal
Rr605160	regulatory region 605160	1448 bp distal
Rr605161	regulatory region 605161	375 bp proximal
Rr605162	regulatory region 605162	1877 bp proximal