rs51353871 SNP Detail

Summary

• ID
  rs51353871
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124034230 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGCTTCTC TTATTTCATG
  GTACTGTAGT TATGCTATTT TCGGACACAT CTGTTTTGCT CTGGTCCTCC CTACCCTCTG
  GCTCAGACAA CCTCTGCTTC CTCTTCAGGG CTTGTCCTTG AGTCATTGTA CATACAATGA
  CTGAGCATTC CACTGATACT CTGCACACTG CTTGTGAGTT TCTGTGGTAA CCATATCCAT
  Y
  GAATGAAGAA GTTTCTCTGA AGAATGTAAT GATTTCTGAG AGACAGGTCT AGAGATAAGA
  ATTTAGAGTT TGAACGCTAC TTCCTTTTAA CAGAATAACA GTGATAGGTT CATAACTGAG
  GACCTATAAG TTCCACAGCA TGTGTTATTA ATCTGATTTA TAATAAGGGG TCTGCAACCC
  TATAGGTGGA ACAACAATAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss135782943	ENSMUSSNP4427264	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss320926567	CHEV_3_123943499	CHEVERUD	SCREENING_POP	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs51353871					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124034230 () rs orientation: forward

Symbol	Name	Function Class
Rr584580	regulatory region 584580	865 bp proximal