rs51348063 SNP Detail

Summary

• ID
  rs51348063
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148546177 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGAC CAGGCTGGCC TCGAACTCAG
  A
  AATCCGCCTG CCTCTGCTTC CCGAA                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss148008285	ENSMUSSNP5114881	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss321420586	CHEV_4_147835829	CHEVERUD	SCREENING_POP	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs51348063					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148546177 () rs orientation: forward

Symbol	Name	Function Class
Mtor	mechanistic target of rapamycin kinase	Intron
Rr604688	regulatory region 604688	296 bp distal
Rr604689	regulatory region 604689	242 bp proximal
Rr604690	regulatory region 604690	1234 bp proximal
Rr604691	regulatory region 604691	1344 bp proximal
Rr604692	regulatory region 604692	1766 bp proximal