rs51329685 SNP Detail

Summary

• ID
  rs51329685
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:97315559 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G CAAGGAGTGT CAGAAGTTCA AAGTCACCCC CAGTTACATA
  ATGAGTCCTC AGAGACCCCA GGAACATAAG ATCCAGTCTC AAAAAACAAA ACAAACAGCC
  S
  CCCCCCCCGC ATCTCCAAAA ACTAGGCTCA ATAAAATTGC AGTTTATTCA TGTAATGGAA
  TAGCACATAG CAAAGAAAAT AGACTAGAGC TACATATAAC A                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss133417543	ENSMUSSNP352739	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs51329685					SNP	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:97315559 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Frmd4b	FERM domain containing 4B			Intron
				Noncoding-Transcript-Variant
Rr635138	regulatory region 635138			483 bp proximal
Rr635139	regulatory region 635139			1511 bp proximal