rs51328422 SNP Detail

Summary

• ID
  rs51328422
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:89261720 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATATTAAA ATACTAGGAG
  TACTATGGAG ATTTTCCTGA GAGCCCCGAG TGTTTTCAGC AGCCTCCCTA CCAGGCAGAA
  GCAGATATGG CCTCTCTAGC TCTCTCACCT GTGAGGAGGC TTCATTCTGG GAGTTTCTCA
  CTCCCCAGCC TGAGTCCTCT GAGCCCACTG CCACAGGAAT AGAAGGGACG AGGAAGTTCT
  R
  CTAAGCCCCG GCAGCATGCA TTCCTCTGGA CTTGATGGCA GGAGAAGGCC ACCTGTGCCA
  CAAGGGTGAG AGCAGATGCT TCTCTGTAAG AAAATCACCT TCTGTAACAA CAAAGGAAGG
  AAAATTAGTC CTGTGCAGAG AAAGAAAGAA TTCAGTCCCC ATGCAGGCCG TTCTCGTTCC
  TCTCCTGGTG TGGCATCTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss133371419	ENSMUSSNP1927597	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs51328422					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:89261720 () rs orientation: forward

Symbol	Name	Function Class
4930512J16Rik	RIKEN cDNA 4930512J16 gene	within coordinates
Rr379731	regulatory region 379731	214 bp upstream
Rr634091	regulatory region 634091	1467 bp distal
Rr634092	regulatory region 634092	457 bp proximal
Rr634093	regulatory region 634093	1373 bp proximal
Rr634094	regulatory region 634094	1599 bp proximal