rs51327923 SNP Detail

Summary

• ID
  rs51327923
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:22496566 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATCCAAAA AAAAAAAAAA
  AAAAAATAAA CCCAACCAAC CAAACAAAAA GCCCAAACAA ACAAACAAAC AAACCCCCAA
  AGTACCCCAA AAACCCAAAA ACAAAAAACC CAACAAACCA GCTTTCCCTG GCTAACTGCT
  ATACCAACAA GCAACAATTT CATTCTCATC AAATTAGGCT TGTGTTTCTT TACTGGTAAC
  R
  TACATATTGA ATGAGTGGCT TCAGAACCAT GTTTGTATTT GTCAAATCAT AACAATGACA
  GTGTCAGGGT AGAATGTCTC CTCATCACTC CCTGCTGCCC TCTACTGACA CCTGAATGAG
  GGGACAATCA CAAGTTTCCA CTCCCTAGCA GGTGGAGAGA TAGTCCTGGA TCCATTCTTG
  ACTCTTAGCA ACTCTGATAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss60871005	NES15983140	PERLEGEN	MM_PANEL2	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs51327923					SNP	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60871005	NES15983140	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:22496566 () rs orientation: forward

Symbol	Name	Function Class
Rr379050	regulatory region 379050	1608 bp downstream
Rr627115	regulatory region 627115	92 bp proximal
Rr627116	regulatory region 627116	731 bp proximal