rs51326730 SNP Detail

Summary

• ID
  rs51326730
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148656342 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTATTTATTT ATTATATATA AGTACACTGT AGCTGTCTTC
  AGACACACCA GAAGAGGTTG TGAGCCACCA TGTGGTTGCT GGGATTTGAA CTCAGGACTT
  Y
  TGGAAGAGCA GTCAGTGCTC TTAACCACTG AGCCATCTCT CCAGCCCCTC CCCCCCCCCC
  CTTTTCCTTC TTTTTGAGAT AGGGTTTTAC CATACAGGG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148011774	ENSMUSSNP556522	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss321421262	CHEV_4_147945994	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51326730					SNP	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148656342 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Exosc10	exosome component 10			Intron
				Noncoding-Transcript-Variant
Rr604704	regulatory region 604704			692 bp distal