CTGTT AATTGAATGT TTTACTTTGC R ATAACTGTAG CCTTACAGAC CTTTG R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|
ss135171979 | ENSMUSSNP3427665 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | G | G | ||
ss320761984 | CHEV_3_51013757 | CHEVERUD | SCREENING_POP | f | SNP | G | A | |||
SNP Consensus Information | ||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
DBA/2J |
LG/J |
SM/J |
||||
rs51315387 | SNP | A | G | G | G | A |
Location: Chr3:51117256 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr576241 | regulatory region 576241 | within coordinates | ||||||
Tssr29031 | transcription start site region 29031 | 452 bp upstream | ||||||
Tssr29032 | transcription start site region 29032 | 477 bp upstream | ||||||
Tssr29033 | transcription start site region 29033 | 517 bp upstream | ||||||
Tssr29034 | transcription start site region 29034 | 532 bp upstream | ||||||
Tssr33189 | transcription start site region 33189 | 345 bp downstream | ||||||
Tssr33190 | transcription start site region 33190 | 1654 bp downstream | ||||||
Tssr33191 | transcription start site region 33191 | 1724 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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