rs51312365 SNP Detail

Summary

• ID
  rs51312365
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:112367710 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGGGAAGAT GGCTTCCAGC
  ATGGTGCCAG GCAATCTGTA GTCTCTCTGT GTCCCTGAGG TTAATGGCAG CTTCTTTAAG
  CTCCTCCACA TGACCCAGGT CCTACTATTC TTCGAGTGAC ACAGCCCCTA AGCACCCAGA
  CCCCGCGGCA TTCATCCTGA CATCTCACAC CAAAAACCTG AAGAAGAAGT ACCCAGCACC
  R
  CCTCCTTCCA CAGGCTGACA CCTGAACACC TTGTTCCCAG AAACCAACTC TGTGGTGTCC
  TTTCCTCATT CTGTAGATCC CAGTTTTGCC ATGGTGGCAG GGAGCATTGA GGACTGGCTG
  AGCTCTCAAT GCGGCCTTGA AACCATCTCA TGTGACTGTC TTTTAATATG ATGGGAAGGG
  GATGCCCAGA AAGGAAGGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss60929786	NES16197538	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A	G	G	G	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs51312365					SNP	G	G	G	A	G	G	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60929786	NES16197538	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:112367710 () rs orientation: forward

Symbol	Name	Function Class
Gm38873	predicted gene, 38873	within coordinates
Rr636340	regulatory region 636340	1127 bp distal