rs51308976 SNP Detail

Summary

• ID
  rs51308976
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:5807007 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTATTTAA CCCTGGATGT
  CATAAAACTT CATACAGATA AAGCATTCTA AGAAATTTGA GAAAATTTTG AAGTTACTAC
  CTACATTTTA ACTGTTGCTT CTGTAAATAC TTTATAGATG GCTAGTGGTC TTCAGAAGTG
  ATTTCTCAAG TCAGATTTCT ATATCTGCAA AACTCCAGGC ATCCCCTGCC TATAATATAC
  S
  CCATTGTCTT TACTCTCTAC CCACAGCTGC TGCCACAGCA TGGCTCTGCC TCAGTTTCCC
  AAAGGTTCCC TCCCTGAAGA TATGCACTGT CACTATGGTA TGACCCATGC CTAGCAGACC
  ACCTGGCATG GACTGGAAGG AGAAGATCTG GGATCTCTCT ATGATTCCTA GTCTTGGAGA
  AGAATGGGTC TGTGGAATGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145955281	ENSMUSSNP2977641	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51308976					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:5807007 () rs orientation: forward

Symbol	Name	Function Class
Rr588338	regulatory region 588338	1071 bp distal
Rr588339	regulatory region 588339	624 bp proximal