rs51308948 SNP Detail

Summary

• ID
  rs51308948
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136799809 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGTGCATC TCTGATATGC
  AATCCTCAGA TGGGGGTCGC AACCCACATT TTGAGGACCA CTGGTCTAGC TTAGTTGGTC
  TAGCCAGTTG TAGCTTAGTT GGTGCAGTGT TAGCTCAGCA CACACAAAGC CCTGGGGTTT
  GTCCTCAGCA CCACAGGTAC TCCGTGTCTT AACCCCAGCA CTTGGAAAGT GGAGGCAGGA
  R
  CATCAGAAGT TCAAGGTCAT TTTTAGCTGT TTAGCGAGTT CAAAGTCAGC CTTGGCTACT
  TGTGATCCTA CTGAAAAGGA AGGAAGGAAG GTAAGAAGGA AAGAAAGAAG GAAGGAAGAA
  GGGACATCTC TGTGGGGGGA TGTGCTTGGC ATGCCCATTT TAGCTGCAGA TTCTTGAAAC
  TGCTCTTCTG AAAAACAAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147592764	ENSMUSSNP599814	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
ss321360833	CHEV_4_136628413	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51308948					SNP	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136799809 () rs orientation: forward

Symbol	Name	Function Class
Gm68277	predicted gene, 68277	within coordinates
Rr602532	regulatory region 602532	982 bp distal
Rr602533	regulatory region 602533	11 bp proximal
Rr602534	regulatory region 602534	282 bp proximal