rs51307325 SNP Detail

Summary

• ID
  rs51307325
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:27158198 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGGGTTTC CCCTTTAAAT
  CCATAAATCT AGACTGAAAA AGATCAATGA CCTCATTCTT CAGGCACTGA GAAGCCACAA
  GTTAGCATGA CCAGGCCTGT AACTGCAGAA CTGTGAATAC CATCTTTTAA AGTACAAGGA
  GAAAGCCTGA TAAAACTCAG AACTGACTGA AATGCCAAAC TACAAGCAAA TTATTAAACA
  R
  TATGTCCTAC AATTACAATG GCTATTTATT TTAAAAGGCT ATTTAAAATA AAACAAAAGT
  TAACTATGTA TGCCTATTTT GCTCTCCACC ATTAGCAGCC AAACAGCTTA TTTTGCTAAA
  GCTTTCTTAG TTTCTTCACG TTTCTTCACA CTTGGGGCCG AAGATGTCGC CCAGGCATTA
  ACTGATACAC TGCTGTAGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134702080	ENSMUSSNP1467252	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51307325					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:27158198 () rs orientation: forward

Symbol	Name	Function Class
Ect2	ect2 oncogene	Intron
Rr574344	regulatory region 574344	693 bp distal