rs51301706 SNP Detail

Summary

• ID
  rs51301706
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:18907963 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGAGGCTT GAACATAGTA
  TTCAGTGGTG TTTCTGCCTG GTTCTGATAG TTAAAACCTC TGGATCCCTC AGATGACTCT
  GATTAGACTC TGTGGGAGAC TAATCAAAAC CAAAACCTAC AATTAAGAGA AAGATTTATT
  GTGTGTGGGA TGGCAGATGA AGGAGTGACA TGGTAGAAAA TTGGGAGAGA AGAACCAGAA
  W
  ACATAGTATA CATGTATGAA ATTGTGAAAG AAAGTGTTTA CTAAGAAAAA TTATGTGAAT
  TAAATTCATT CATTCACCTT ATAAAGGAAA GGATTTTCTA TATAGAATTC CATTTTCTCA
  GGGAGGTCTC CTATGAGACT AACGTGTTCT TGTGCAGTAG GAGAAACAAA CATCAGAGTA
  AAGAGGAAGC CCGCATAGAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133043337	ENSMUSSNP4838464	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51301706					SNP	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:18907963 () rs orientation: forward

Symbol	Name	Function Class
Rr626961	regulatory region 626961	561 bp distal