rs51301699 SNP Detail

Summary

• ID
  rs51301699
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:89261729 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATACTAGGA GTACTATGGA
  GATTTTCCTG AGAGCCCCGA GTGTTTTCAG CAGCCTCCCT ACCAGGCAGA AGCAGATATG
  GCCTCTCTAG CTCTCTCACC TGTGAGGAGG CTTCATTCTG GGAGTTTCTC ACTCCCCAGC
  CTGAGTCCTC TGAGCCCACT GCCACAGGAA TAGAAGGGAC GAGGAAGTTC TGCTAAGCCC
  M
  GGCAGCATGC ATTCCTCTGG ACTTGATGGC AGGAGAAGGC CACCTGTGCC ACAAGGGTGA
  GAGCAGATGC TTCTCTGTAA GAAAATCACC TTCTGTAACA ACAAAGGAAG GAAAATTAGT
  CCTGTGCAGA GAAAGAAAGA ATTCAGTCCC CATGCAGGCC GTTCTCGTTC CTCTCCTGGT
  GTGGCATCTC CATTGTCATT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss133371422	ENSMUSSNP4667883	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs51301699					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:89261729 () rs orientation: forward

Symbol	Name	Function Class
4930512J16Rik	RIKEN cDNA 4930512J16 gene	within coordinates
Rr379731	regulatory region 379731	205 bp upstream
Rr634091	regulatory region 634091	1476 bp distal
Rr634092	regulatory region 634092	448 bp proximal
Rr634093	regulatory region 634093	1364 bp proximal
Rr634094	regulatory region 634094	1590 bp proximal