rs51299891 SNP Detail

Summary

• ID
  rs51299891
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:101294325 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATCTCCTC AGCGCTGCAG
  CATTCCAGGC TCCTGTCAGA AGAGCACGCC CATGGCTCCC TACCCCAGAA ACTCAAACTA
  CCATGGAAAC GGCTTTAATA CCCAACTCGT GCAAGAAACT TAAGAGAAAT CCAATGAGAT
  GCTGAATAAT GAGTGTGTGA GAGGGATAAG GCTCAGGAGT CAGACAGAAC TGCATCCACA
  Y
  TGGACATCTT CATTGGCTAA CTGTTTGATC TTGGATGAAT ACTGTCTCTG GGCGCGCGCG
  CGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTATGTGCG
  CGCACACGCG CGCGCGTGTA TCTGTGTGCA TGGGTGTATA AGTTGTGGAC TCTACTCAAG
  CCCTAGTATC CATCAGGCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320428369	CHEV_2_101304137	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs51299891					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:101294325 () rs orientation: forward

Symbol	Name	Function Class
Rr561500	regulatory region 561500	1202 bp distal
Rr561501	regulatory region 561501	497 bp proximal