rs51295588 SNP Detail

Summary

• ID
  rs51295588
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148685629 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATACCTGC CTGTGCTGGG
  CTCCAGTTTT TTAACCCCAG ACTGCAAAAC TAACAAAAAT ATAAACAGGG GTTAATTTTC
  ATGCTAATAA CAGAAACATC ACAGAGACAA AATTTTATTT CATTAGATTC CTCCCTCACC
  CCCAGGAAAC AATAAAATAA GCGAAGGCAT TTTAAAATGG AGGATGTAAC AATATGTGAA
  M
  TGCCTTTTGT GTACACTGTG GGTACCACAG CACTCACAAC CAAATAGGCA AAGGGTGTTA
  GTGTTCCTCT TTATTCTCCT ATTAAAGCAA TCAGAGAAAG CACAACTAGC CCGGTATTTT
  ATTCCCCACC ACAGAAGCCC AGGGTATCTT AACTCTAGGC TATAATTTCT ATTTGTTGAC
  ACAATGAAGT AGTTTTGTAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss136065904	ENSMUSSNP7110193	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51295588					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148685629 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Rr587237	regulatory region 587237	1074 bp distal
Rr587238	regulatory region 587238	1304 bp distal
Rr587239	regulatory region 587239	1845 bp proximal