rs51291767 SNP Detail

Summary

• ID
  rs51291767
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:33688412 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGATAAGCA GATTATAAAT
  AGTCACTATA TAAATACTCA GTTTTATTGG CTGTGGCAGC AAGTGACTGT TTAAGTGAAG
  ATCATAGCAC AATTAAGAAT ATAATTGTTT TCATCCTCTG GATAAAGTTT AACAACTTGA
  TTTTCTTTCC GATAATCCCC AGTGGATCTA CCTTCCAACA TTCCCCAGTA TGCCTCAGCA
  Y
  GGCCAAATCA TCAGCAACCA TTAGAACTGA CTAGTCCACA GGTGAAAGTT TCTCTTTAGA
  CCCTTGGTGC TGGGATTTCT CAATTCCCAC CTTACTTCTC CTGTGGAGGG AAGATGGAAA
  CAGATATGTC TATTGAGGAG AGTCTGTCTG ACAACTTTAT ACTTGCTCTG TTTTCTCTAG
  GGCCTTCTGT TTACTTAATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss133107885	ENSMUSSNP6105829	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51291767					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:33688412 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Exoc4	exocyst complex component 4			Intron
				Noncoding-Transcript-Variant
Rr628208	regulatory region 628208			350 bp proximal
Rr628209	regulatory region 628209			930 bp proximal