rs51285354 SNP Detail

Summary

• ID
  rs51285354
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:119831467 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCTTGCATT CTCCCTCTGG TTGTTGAATG TCTTCTGTGT
  TTGTTTTGAA AAAGGGTCTA ACTGTGTTAA ATGCCTAGGC TCAAATAATC TTCCCATCTC
  C
  GCCTTCCAAA AAGCAGGACC TGCAGATGCA GCCTGCCGCC TGGCTTCTTC TCAAAAATTT
  TTATAAATAC CTCCCTCCTG TGTGATTCCA GACTCACCC                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss133593611	ENSMUSSNP663669	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs51285354					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119831467 () rs orientation: forward

Symbol	Name	Function Class
Rr380000	regulatory region 380000	within coordinates
Rr637739	regulatory region 637739	within coordinates
Rr637740	regulatory region 637740	1038 bp proximal