rs51282504 SNP Detail

Summary

• ID
  rs51282504
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135623384 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTGAAACA GATAGCCACT
  CTAGGCCAAA GAAAATTTGC TTCCAGTCCA GCTTAGTGAA TGGGACAAAC TTATTGGTGT
  TGTCTGTAGG GACATGGGTG GCTTGGGCAA TTGTATCATC AAAAAGCCTA CCCCAGCATG
  GTGACAAGTG CTCAAAGCTA GTGACATCGC TGGTGTCCCC ATTAGTTGAC AGTCCACCTC
  T
  AAGCAGCAGA CAGGACGGTT TGCAGGGGTG AAGCAGGAGG GAGGGATGGA GTGTTGGAAC
  GTCAGGGGAG GGTCTAATGA CCCCACACAC AGGGACTGGT ACAGGCACGA TTTTTTGAAG
  GCCTCCTGTA GATAATCGAA GCTGTTGGAA AGAAAGGGCC ACACAAGCCC AGGGAACAGA
  ATTCCACGCC ACACAGATCT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147553231	ENSMUSSNP5285896	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51282504					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135623384 () rs orientation: forward

Symbol	Name	Function Class
Cnr2	cannabinoid receptor 2	Intron
Rr602183	regulatory region 602183	669 bp distal
Rr602184	regulatory region 602184	375 bp distal
Rr602185	regulatory region 602185	within coordinates
Rr602186	regulatory region 602186	799 bp proximal
Rr602187	regulatory region 602187	922 bp proximal
Rr602188	regulatory region 602188	950 bp proximal
Tssr39650	transcription start site region 39650	878 bp downstream
Tssr39651	transcription start site region 39651	677 bp downstream
Tssr39652	transcription start site region 39652	597 bp downstream