rs51262156 SNP Detail

Summary

• ID
  rs51262156
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:132405552 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACATCTTAG AAAATACTTT GCTAGGCAAT TGTTTTCTAG
  AAGTCAATCA TGGAAGCTCT GTGTTTTCAG GTACTGTCCT TTTACGTGAA TGTTCTTTAC
  R
  TGGGTGTTGT GTTTTATATC CCAGATCTGT ACGTGGGTGA GATCTTATTC TCAAGGAACC
  TTTCCAGTTT TCTCCATGCA AAGTGTAAGG AAAGTGCAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss135913824	ENSMUSSNP5039264	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51262156					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:132405552 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr585446	regulatory region 585446			1668 bp proximal
Tbck	TBC1 domain containing kinase			Intron
				Noncoding-Transcript-Variant