rs51262109 SNP Detail

Summary

• ID
  rs51262109
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:178398966 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGATGCCTG GGAGTTTGGG
  AACCCCTGTC TCCTCAGCCT TAGCCTGTGT CATTTCTCAC ATAGGCTGGT CCCCATCTTA
  GGCTGTGTTC TGCCACTCTG GCACCCCAGT GGTGGTCAGA TAGAGCGACG TACACACACC
  GCAGCTTTGA GGTGGAATGT GGACCCAATG GAGCAGGTGG AATGCAGAGC AGGGATGTGG
  R
  TACAGACCTT AGAGGACCAC AAGGTACAGG CAAATCCAGG CCAAGACTGA GGAGACAAGT
  GTTACCCCCA TGAGTGGTGA GTGAGTCCTC TGCTCTATCT CTGACTCAGG GCAGGGATAT
  GTGCTCTCAG GGGAGACGGA GAAGACACTC AGGAGGTGAT ACATGGAGAA CAGGGGTATC
  CTGATTTTTT TTTAAATGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148370277	ENSMUSSNP3824928	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
ss320629012	CHEV_2_178491878	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51262109					SNP	G	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:178398966 () rs orientation: forward

Symbol	Name	Function Class
Gm74610	predicted gene, 74610	935 bp downstream
Rr572464	regulatory region 572464	1277 bp proximal
Rr572465	regulatory region 572465	1372 bp proximal