rs51257472 SNP Detail

Summary

• ID
  rs51257472
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:145811578 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAAGAAAAT GCCCTTCAGC
  TGGATCTCAT GGAAGAATTC TCTCAGCTGA GGCTCCCTCC TCTCTGATGA CTCTAGCTTG
  TGCCAAGTTG ACATAAAACT ATCCAGCACG CAAATAGAAC CACTTAAAAC AATGGTCTTG
  GACGACAGAG ATACAATTGA TGCTTTGATT AGTATTTTAT GCTTCTGACA TTTTTTGGGG
  R
  AAATTTCTAT TCAGTCTTTC TATCCCTCAC TCCTGCCACC GCTGCCCTAT GTGTACACAC
  TACTTTTTGA CTTGACTTTT GGCCATCAAA CTCAGATGCT GTCATGGTTT GAATTTGCTT
  GGCACAAGGA GTGGCACTAT TTGAAGGTGT GGCTTTGTTG GAGTAGGTGT GTCACTGTGG
  GCGTGGGCTT AAGACCCTGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136042033	ENSMUSSNP3195871	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51257472					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:145811578 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dnai3	dynein axonemal intermediate chain 3			Intron
				Noncoding-Transcript-Variant
Rr586924	regulatory region 586924			1322 bp proximal