rs51248017 SNP Detail

Summary

• ID
  rs51248017
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:174333523 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGCCACAT GGAAGAGGAT
  CTCCAGAACG GCTCTGAAAA GGCGAAGAGA AGGTCCTGCC CCAACGGATG GAGCACCGTG
  GAATAGTTGT CTCAGCTTTG AAAACACAGT GATACTGGAT TATAATGATG GGCAGAGAGA
  AACGAACAGC TTTCAACCCA GCCTGGCCCG TGTGGCCCAT GTGGCCCGTG TGGCCCGGCG
  Y
  AAAAAGGTGG TTTACATCAG CTTTTTGGGT CCAAAGGGAG AGGAGGGGGG CAGTGAATGG
  AATGCTGGGA TAGGCAGCGA AGAGCCTGGG GGAGGGGGCA CATTGGATCA CCCCAGGCGA
  TGTGACAAAA TCAACCCAGA TCAAACAGAG AGAAAACACT AGAAGCCAAA AGGCCTGTAA
  AGACCCAAGT GAATATTTAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss148344092	ENSMUSSNP5870692	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs51248017					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:174333523 () rs orientation: forward

Symbol	Name	Function Class
Rr572141	regulatory region 572141	1226 bp proximal
Rr572142	regulatory region 572142	1329 bp proximal