rs51234905 SNP Detail

Summary

• ID
  rs51234905
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147900202 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAA TCAGCCTGCC TCTGCCTCCC
  R
  AGTGCTGGGA TTAAAGGCGT GTGCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147983273	ENSMUSSNP216236	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss321414957	CHEV_4_147189854	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51234905					SNP	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147900202 () rs orientation: forward

Symbol	Name	Function Class
Rr398848	regulatory region 398848	939 bp downstream
Rr604504	regulatory region 604504	717 bp distal
Rr604505	regulatory region 604505	974 bp distal
Tssr44549	transcription start site region 44549	1070 bp upstream