rs51234524 SNP Detail

Summary

• ID
  rs51234524
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34284721 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCTGAATC AGATGTATAA
  CTTTAATTTT TTCCAGAACC TGTTTTTTAA CCATGGTTCT TAAATGCTTT AACCTCCCCT
  TTAGCCCACC ACCCACCAGA AAGAATATGG AGGAAGTAGA CCAGTAGAAT GGTCCTTTGG
  AGCAACTCCC ATCTGTATTG TTGGAAATCA ACAGTTCCGT TCACAGGTTA GCAGCAGCAA
  Y
  AGCTCAATCC ACTAGCAAGT ACTTCATGGA TACACCAGCA GTCCAGTTCA ACAGAGTTGG
  GTTAGCAACA GCGGTGAGAC TGCCTGCAGA GACAGCGAGA GACAAGTCAG CAGGAGGGAC
  CAGAAGGAAC ACAGGAGTTC TTGGCTGTGC CTCTCTCAGG GAAGGGAAAA TCAGCATAGA
  CTCCAGGCTC AGAATTGTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss134764563	ENSMUSSNP5226046	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51234524					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34284721 () rs orientation: forward

Symbol	Name	Function Class
Rr575112	regulatory region 575112	1200 bp proximal
Rr575113	regulatory region 575113	1482 bp proximal