rs51213703 SNP Detail

Summary

• ID
  rs51213703
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122205833 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCGTAATCC AATGAGTTAA TTTATGTAAG GCTCTTAGAA
  CAGTATCTGT GTAAGGTACA TTATGTGCAT TATATTTAAT TAGGAGAGCA ATTGGTATTC
  R
  TTGTGGGGAG GAATCAAACA GCCTAGAAAA ACTTGAAGAA ACTAGGAAAG TCCCTTTCAC
  TACCTCAGCG ACTTGGCTTT CTCAGACTCT CTGATGGGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J
ss60442587	NES15946502	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	G	G	A	G		A	A
ss135741062	ENSMUSSNP1787652	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss320911395	CHEV_3_122115102	CHEVERUD	SCREENING_POP	f	SNP								A			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J
rs51213703					SNP	A	G	A	G	G	A	G	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60442587	NES15946502	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122205833 () rs orientation: forward

Symbol	Name	Function Class
Rr584323	regulatory region 584323	289 bp distal
Rr584324	regulatory region 584324	1558 bp proximal