rs51198881 SNP Detail

Summary

• ID
  rs51198881
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:142147644 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATTTTGGC TAACTTGAGC
  TAATGGTATA ATTATGCACA AATCACCCAC ATATTCTAAG ACCTTGAAGG AGATCAGCCT
  AATGAGCATT TCTCAGCCTA CGAGACACAA ATTTGGAGAA TTGTGTCTAC TGAAGTCAGA
  GGACCATATG TAACTATGAT CATATATGAT CATACATAGT TACACATGTA ACTATGATCC
  R
  GAATTGTCTG TTCAGATGAA AGTCATGGAG AGATGATGTT TGAGAGGACC CTGGACTGTT
  CGGGTGGCTG ATAATTCACT CACAACCTTT TCCTCTGTCT TCTATATTTA TTAAGAGTAT
  TTGACAAGAA TAAAACCAAT CATTTCTCAT TTCTACTTTG TAGTAAAATA TCCTTGGATG
  CTGGGGAAGT ATAATTAATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss136013515	ENSMUSSNP4342287	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss321001617	CHEV_3_142104847	CHEVERUD	SCREENING_POP	f	SNP		G	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs51198881					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:142147644 () rs orientation: forward

Symbol	Name	Function Class
Gm64781	predicted gene, 64781	86 bp downstream
Rr586432	regulatory region 586432	1141 bp distal
Rr586433	regulatory region 586433	334 bp proximal
Rr586434	regulatory region 586434	1052 bp proximal
Rr586435	regulatory region 586435	1657 bp proximal