rs51195421 SNP Detail

Summary

• ID
  rs51195421
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108071302 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGTGGGAA TGAACCTGTG
  TTCTGTCTCC ATAACCCACA TAAAACTCCA GCTGTAATGA GACATACTCA TAATCGCAGC
  ATTGGAGGCT GAGGGGCTGG GGACAGGTGA ATCTAAAGTC TGAATCTCGG GTTTGCTGGG
  CACACAAACG TTACTTTTAC TTTGTTCTTT TCTATCTACG AAGAAAGTCA TTTGAAATAC
  Y
  CCAGCCCCAG TTTCAGCCCG TAAAGAATGT TGCTCTGGGG ACACAGAGTA AGAATTCACC
  TCTTGTCACA GTGCCAACCT GCTTATAAGA AGAGTCTTGC AGAGATTACA AGACATAGAA
  GTTTGGGAAC CATGATCATG GTACAAACCC TCCAGTTTCC AACAACAACA AAAGCACATG
  GCAAGTATAA CCTAAAGGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss133494835	ENSMUSSNP7216440	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss321891656	CHEV_6_108044335	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs51195421					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108071302 () rs orientation: forward

Symbol	Name	Function Class
Rr636032	regulatory region 636032	533 bp distal
Rr636033	regulatory region 636033	1147 bp proximal