rs51193413 SNP Detail

Summary

• ID
  rs51193413
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60981720 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TTGTTTGTTT TTTGTTTTTT TTGAGACAGG GTTTCTCTGT
  GTAGCCCTGG CTGTCCTGGA ACTCACTGTG CAGACCAGGC TGGCCTCGGA CTCAGAGATC
  Y
  GCCTGCCTCT GCCTCCTAAG TGCTGGGATT AAAGGCGTGC GCCACCACTG CCCGGCTACT
  CTGCATTTTC ACCAAGCTGT CTGATGATGT AGTTCCTCCA G                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss135222453	ENSMUSSNP6072335	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs51193413					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60981720 () rs orientation: forward

Symbol	Name	Function Class
Rr577472	regulatory region 577472	1599 bp distal
Rr577473	regulatory region 577473	1581 bp proximal