rs51186508 SNP Detail

Summary

• ID
  rs51186508
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:106485994 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACACTCAC TCCCAAGGTG
  TCACACCCAA TCCCTAAACT TCCCCCACCA GTCCGTTTGC TACCCTGCCA CAAGCTTTCT
  GGAGGCTGGC TCAGTGACCT TCTGGGATCC CTGGTTGGAG CAGAGGACCT CAAGTTTCTG
  TTATTCCACA CACCTGCTGA GGCAGGGAAG CGAGAACACT AGTACCCCCA GCAGAGCTGG
  R
  AGGACTTCTT CCTGTCCTGT CCCTGTGCTC TGGCCCGGTC TGTCACCACG GAAGACATTC
  CAGTTGCGCC AGAAGGACAC ATTCCTAGGC AGGTCTGACA CCTTCCAACT GTTCCTGGCA
  GTTGAAAAAC CAGTTTTTGG AGAGAGGCAA ATGAGAACCT GAATCCTGCC TGGCCCTTCT
  GCTTGGACTG AGGCATTGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147169407	ENSMUSSNP6180648	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51186508					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106485994 () rs orientation: forward

Symbol	Name	Function Class
Rr596781	regulatory region 596781	within coordinates
Rr596782	regulatory region 596782	1504 bp proximal
Ttc22	tetratricopeptide repeat domain 22	Intron