rs51183109 SNP Detail

Summary

• ID
  rs51183109
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:119072290 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GGGTATGTTG GTTTTACATT TGTATGGTTC TTTGTCCAGG
  TGTGCTTTCT ACTCACCAAG GCCAGAGGGT AATATACGGG AATCTGTTCT CTCTTCACTG
  K
  GTGTTTCCTG GGCATCAAGC TCAGGTCAGG CTTGCTGGCA GATACCTTCC CCCTGCTGAG
  ACATCTTACT GACTCAAAAG TTAAATTTTA GATAGAGTGT G                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147326976	ENSMUSSNP1668275	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51183109					SNP	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119072290 () rs orientation: forward

Symbol	Name	Function Class
Rr563451	regulatory region 563451	1173 bp distal
Rr563452	regulatory region 563452	786 bp proximal
Spint1	serine protease inhibitor, Kunitz type 1	Intron
Tssr19620	transcription start site region 19620	1162 bp downstream