rs51179642 SNP Detail

Summary

• ID
  rs51179642
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:67038931 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C ACACTCAGGG TTATGGTAGG AAGGAAAAAT GACATAAATT
  ACCACTTTCT AATGATTCGG GAGTATGAGA GGGACACAGG ATTTTTTAAA AAAACATATT
  A
  ACGAAGAAGT TATGGGTAAA TGGAAAGAGC CAAATTACTT AAAGGTTGTT TGTTATTATT
  ATTATTACTG CAGTGACAAT TGCGTATTTT CATTCTGCTG G                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144529098	ENSMUSSNP1542942	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51179642					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:67038931 () rs orientation: forward

Symbol	Name	Function Class
Lancl1	LanC (bacterial lantibiotic synthetase component C)-like 1	745 bp downstream
Rr412496	regulatory region 412496	727 bp proximal