rs51174820 SNP Detail

Summary

• ID
  rs51174820
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:31612459 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAGCTAAA CACAGCTGGT
  CTCCCATCTT GTTACGTTGA ACACCTCTGA TTACTCACGC TAGCTTTCTA AATCAAGTCT
  CACCTATTTC ACATAGAAGT GAGTGTTTCT TACTTACCAG AATTTAATCA CATCAGTGGT
  TTTCCCCAAG GAAGTGAATG TGTCACTTCC AAATAGACAT CAGAGGGCAA TGTTGCTACT
  S
  TGTGTGATAC TTCACAGTCA CCGCTGATTT AAGGGCCAGG CGAGGCAGAA CACTGCTGTC
  ATCCCAAAGG CAGAGGCGGG AACAGAGTCA GAATTTCAAA GCCAGCCTGG CCTACATAAA
  AAGTTCCAAG CCAACCAGGC CTGTATAATG AGATCCTGAA TCCAGTCTCA AAAACAAGCA
  AGCAATCCAA AAAACAAAAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss137568588	ENSMUSSNP5355743	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs51174820					SNP	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:31612459 () rs orientation: forward

Symbol	Name	Function Class
Gm48524	predicted gene, 48524	406 bp upstream