rs51158161 SNP Detail

Summary

• ID
  rs51158161
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17674470 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAACTGTC TTCTAGTAAT
  GTCAGATGCT TCAGCCATAA AGTCTCACCA GCATGACTGC CTAAACACTA GCCAAGCAAG
  AACAACAATA GCAGACATGC TAAGGTAGCG GGAAGAGACC ACATGACATC AGTCCTACAT
  GAAGAACCAG TAATGAATGC TGAGAGTGTA AGAGTCTTCC CCAGGGAAGA GCACACTGAT
  W
  TAGCAATCTA AAACCAAGTG GTCAGATTTG AAAACATACA TTCAAGTATC ATTACATAGA
  CTGAACAAGT TATACTTTAG GCTACATATG TATATGCTTA TACATATATA CATTAATGAA
  AACGGGGTGT TAATTTGAAA TAGCAAGAAG GAGGAGAGGG AAGGAAGAAA TGATGGAATC
  ATTTTATAAT CTCAAAAGTA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133020143	ENSMUSSNP2493547	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51158161					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17674470 () rs orientation: forward

Symbol	Name	Function Class
Rr399579	regulatory region 399579	977 bp upstream
Rr626829	regulatory region 626829	820 bp proximal
Rr626830	regulatory region 626830	1103 bp proximal