rs51155773 SNP Detail

Summary

• ID
  rs51155773
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124379494 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAACTCACA GAAACTGAAC
  ATCTCACTAC TGAATGAAAA CTGCGTCAAG ACAGAAATCA AAAACGAAAC ATTTTTTAAA
  GAATTTAATA AACACAGACC ATGCCCAAAC CTATAGAACA TACAGAAGGC AGTTCCAAAA
  GACTAAGTTC CTACATCCCT ACATCAAAAA ACCCTGTAGA CATTTCATTT TAGTGATTTA
  W
  TGAAATTCCT GGAGGCTCTA GAACAACAGG AAGAAATAAT ACCCAAAGAG AGTTAAGGTG
  AAGAATAGTC AAATGTGGGC TGAAATCCTT GAAATAGAGG TCTGATGTCC TCTGCTGGAC
  GATGTGGGCA CATGCCCTCA CATGTGGCCA TAATTACCGT CACATCACAT ACACAAATAC
  TCATGGTTTG AAATAAATTA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135790702	ENSMUSSNP969841	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	T
ss320929392	CHEV_3_124288763	CHEVERUD	SCREENING_POP	f	SNP				T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51155773					SNP	T	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124379494 () rs orientation: forward

Symbol	Name	Function Class
Rr584593	regulatory region 584593	102 bp proximal
Rr584594	regulatory region 584594	1770 bp proximal
Rr584595	regulatory region 584595	1882 bp proximal