rs51132530 SNP Detail

Summary

• ID
  rs51132530
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:90498436 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A ACAATTTGTT GAGAGTAACA AAGACCCAGC TCATGATCTT
  GCAAGTTTAA TGCTCTAATC ATTAACAGAT GGTGCCCAGT TTCCTAGAAA CTGCAGAATT
  Y
  TGAGGCCAAC ACCCACTCTG CCCCACACCA CACCGCTGAT TTCAGTTCCT TCATAGATAG
  TGGCACAAAG TCCCACCACG TGCTTGCTTA GCACTGCACT G                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146921076	ENSMUSSNP6217467	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51132530					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:90498436 () rs orientation: forward

Symbol	Name	Function Class
Gm39871	predicted gene, 39871	within coordinates
Gm75678	predicted gene, 75678	within coordinates
Gm75681	predicted gene, 75681	within coordinates
Rr560554	regulatory region 560554	within coordinates
Rr560555	regulatory region 560555	1729 bp proximal