rs51125631 SNP Detail

Summary

• ID
  rs51125631
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:13152129 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGTTCAAA GCCAGCTTGT
  GGACTACATT GTAAAAACCC TGTCTCAAAT AGATAAGCTA AAGTGGATAG AAGGAGCACA
  TAGGCAAGTA CTCTGCCTTA AAGAGATTCT TTTTAGGATG TCATTTATAT GGCTTGGTTA
  TATTCTTATT TCTCAATGGC ATCATAAAAT ATAGTCTCAA CTACCTGGAA CACTGTCTCT
  Y
  TTAATTGATC AACATTTCCC AATTCACAGA ATAATGGAGA AAATTCTGTC TAACCATATA
  CTACTCAAGG CAATGTAAAC TTCTGATGAA TTCAGTACAT CACTACATCT TTACGTGGAT
  GTAATATCCC TTACTAGCAC AATGGGAACT GTGAACTGCC AAGGCAAGTG CCTACAATTA
  CCAGGCAATC ATCCAATGTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss133003225	ENSMUSSNP5622018	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs51125631					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13152129 () rs orientation: forward

Symbol	Name	Function Class
Rr626556	regulatory region 626556	70 bp proximal
Rr626557	regulatory region 626557	315 bp proximal